Article

Category Archive Article

BIOCHEMICAL COMPOSITION, NUTRITIONAL VALUES, AND CALORIE CONTENT OF ALLIUM SPECIES: A SYSTEMATIC REVIEW

M.I. IVANOVA, A.A. BAIKOV, E.M. GINS, V.K. GINS, A.I. KASHLEVA, M.S. GINS, S.M. MOTYLEVA, V.F. PIVOVAROV, and N.V. SMUROVA

Citation: Ivanova MI, Baikov AA, Gins EM, Gins VK, Kashleva AI, Gins MS, Motyleva SM, Pivovarov VF, Smurova NV (2024). Biochemical composition, nutritional values, and calorie content of Allium species: a systematic review. SABRAO J. Breed. Genet. 56(3): 963-972. http://doi.org/10.54910/sabrao2024.56.3.6.

Summary

The latest review discusses the chief metabolites of the genus Allium L., which characterize their nutritional qualities. The publications presented in the leading databases, such as Web of Science, Scopus, PubMed, Science Direct, and NCBI bore analysis. The vital active phytochemicals of Allium species include ascorbic acid, fatty acids, and carbohydrates. Many believe these biologically active compounds can prevent cancer development, coronary heart disease, and atherosclerosis.

Allium L., biochemical composition, nutritional values, calorie content, onions, chives, garlic, leeks

The analysis of the experimental data on metabolites of onion crops based on their nutritional values in light of the functional nutrition concept is currently relevant. The genus Allium L. species are an integral part of the human diet and a valuable source of biologically active substances.

Download this article

SABRAO Journal of Breeding and Genetics
56 (3) 963-972, 2024
http://doi.org/10.54910/sabrao2024.56.3.6
http://sabraojournal.org/
pISSN 1029-7073; eISSN 2224-8978

Date published: June 2024

« Back to main page of SABRAO Journal of Breeding and Genetics Vol. 56 No. 3

GENETIC STUDY OF AMYLOSE CONTENT AND YIELD-RELATED TRAITS IN SORGHUM GERMPLASM

D. WIRNAS, TRIKOESOEMANINGTYAS, E.P. RINI, S. MARWIYAH, D. SOPANDIE, and A. NUR

Citation: Wirnas D, Trikoesoemaningtyas, Rini EP, Marwiyah S, Sopandie D, Nur A (2024). Genetic study of amylose content and yield-related traits in sorghum germplasm. SABRAO J. Breed. Genet. 56(3): 951-962. http://doi.org/10.54910/sabrao2024.56.3.5.

Summary

In the breeding program for high-yielding sorghum, grain quality improvement needs high consideration to meet consumer demands. Thirty sorghum genotypes underwent genetic variation evaluation, with 13 undergoing assessment for genotype by environment effects on the amylose content. The research proceeded in three Indonesian provinces from June–December 2022. The results showed genetic variations among the sorghum genotypes for amylose content and yield traits with a high and medium heritability for yield traits and amylose content, respectively. The genotype Demak 4 had the lowest amylose content (8.57%), and 10 genotypes with amylose content had a range of 10% to less than 20% (Keris M-3, 431, CK.2, Rumbia, Pulut 3, Keris, Gadam Human, 867.032, Lokal Bima 3, and Cantel Ketan), and 19 genotypes showed amylose content higher than 20%. No correlation between amylose content and yield exists. The analysis of combined variance showed that genotypes had a highly significant effect; however, location and the interaction of genotype and location had no significant influence on the amylose content of sorghum. Genotypes Pulut 3 and CK.2 consistently received a heterowaxy classification, with Demak 4 classified as waxy sorghum by growing in three different environments. This data would benefit the selection of promising genotypes for crossing and designing a breeding program to develop high-yield cultivars with low and medium amylose content.

Amylopectin, GE interaction, rice, simultaneous selection, quality

The information produced by this research would help breeders select parental candidates in a breeding program for developing high-yielding cultivars with low or medium amylose content. The recommended genotypes for sources of genes controlling amylose content are Demak 4, Pulut 3, 431, CK 2, Lokal Bima 3, and Cantel Ketan.

Download this article

SABRAO Journal of Breeding and Genetics
56 (3) 951-962, 2024
http://doi.org/10.54910/sabrao2024.56.3.5
http://sabraojournal.org/
pISSN 1029-7073; eISSN 2224-8978

Date published: June 2024

« Back to main page of SABRAO Journal of Breeding and Genetics Vol. 56 No. 3

MOLECULAR CHARACTERIZATION OF THE SUGARCANE CULTIVAR GMP3 MUTANTS INDUCED THROUGH COLCHICINE USING PCR-RAPD MARKERS

MAHFUT, P. KENDARI, E. SUSIYANTI, A.N. AHYAR, and R. BANGSAWAN

Citation: Mahfut, Kendari P, Susiyanti E, Ahyar AN, Bangsawan R (2024). Molecular characterization of the sugarcane cultivar GMP3 mutants induced through colchicine using PCR-RAPD markers. SABRAO J. Breed. Genet. 56(3): 940-950. http://doi.org/10.54910/sabrao2024.56.3.4.

Summary

Plant breeding’s rewarding polyploidy analysis can happen by observing molecular characteristics. Previously obtained 21 sugarcane mutants had used colchicine induction on the GMP3 cultivar at the PT Gunung Madu Plantations, Lampung, Indonesia. However, little information emerged related to the informative molecular markers and analysis of molecular characteristics in sugarcane mutants. The presented research complements previous studies regarding the characterization of superior sugarcane mutants based on agronomic and anatomical attributes. The said research ran through PCR-RAPD amplification using five primers. The DNA band pattern diversity analysis ensued using MVSP program version 3.2. The cluster analysis through UPGMA also estimated the genetic distance. Polymorphic band assessment employing the polymorphism information content (PIC) also helps determine the informative level of the used primers. The PCR-RAPD markers’ screening results showed that four informative primers (OPN-07, OPB-19, OPA-04, and OPA-07) have PIC values ranging from 0.30 to 0.39. The molecular characterization showed that 21 GMP3 mutants had 35–60 DNA bands with 28 polymorphic bands and a similarity index of 0.47–1.00. The promising results would help increase sugar production and improve quality by inducing mutation in the sugarcane cultivar GMP3.

Sugarcane (Saccharum officinarum L.), sugarcane cultivar GMP3, cluster analysis, genetic distance, markers, molecular analysis, PCR-RAPD, polymorphism information content (PIC)

In analyzing the molecular traits in colchicine-induced sugarcane mutants, the PCRRAPD markers OPN-07, OPB-19, OPA-04, and OPA-07 appeared relatively informative, with a PIC value of 0.30–0.39. The genetic variation analysis of 21 GMP3 mutants had 35–60 DNA bands with 28 polymorphic bands. The phylogenetic analysis showed that all sugarcane mutants have a similarity index value ranging from 0.47 to 1.00, with groupings based on mutagen concentration and soaking time.

Download this article

SABRAO Journal of Breeding and Genetics
56 (3) 940-950, 2024
http://doi.org/10.54910/sabrao2024.56.3.4
http://sabraojournal.org/
pISSN 1029-7073; eISSN 2224-8978

Date published: June 2024

« Back to main page of SABRAO Journal of Breeding and Genetics Vol. 56 No. 3

GENETIC DIVERSITY AMONG SEEDED DATE PALM GENOTYPES USING START CODON TARGETED (SCoT) MARKERS

A.H. ANANY, KH.A. SOLIMAN, A.M. ABUSHADY, A.A.H. ELHALWAGI, S.G. THABET, and A.M. ALQUDAH

Citation: Anany AH, Soliman KA, Abushady AM, Elhalwagi AAH, Thabet SG, Alqudah AM (2024). Genetic diversity among seeded date palm genotypes using start codon targeted (SCoT) markers. SABRAO J. Breed. Genet. 56(3): 929-939. http://doi.org/10.54910/sabrao2024.56.3.3.

Summary

Discovering its genetic diversity and background is crucial for the date palm (Phoenix dactylifera L.) genetic resources management and conservation. In the latest study, the start codon targeted (SCoT) molecular marker utilization determined the genetic diversity and set the distinctive genotypes in 10 seeded date palm (P. dactylifera L.) genotypes. The genotyping attained through SCoT markers assessed the genetic variations in the date palm genotypes by the dendrogram. The highest genetic similarity of 89% was evident between the date palm genotypes G8 and G9, while the lowest similarity of 71% was between the genotypes G10 and G1 and G1 and G8. Overall, 160 bands amplified through 10 seeded date palm trees ranged from 150 bp to 1600 bp. Having the lowest value of PIC grouped the markers SCoT-02, SCoT-03, SCoT-04, and SCoT-09 into a cluster based on the heat map plot. However, the genotypes G4 and G5 are in a cluster along with genotype G6. The genetic association stemmed through genetic parameters using PCoA, heat map, and genetic distance. These findings can help identify the genetic diversity of anonymous date palm genotypes.

Date palm (P. dactylifera L.), date palm genotypes, genetic distance, genetic diversity, heat mapping, PCoA, SCoT markers

The results enunciated that the highest genetic similarity of 89% was between the date palm (P. dactylifera L.) genotypes G8 and G9, while the lowest value of 71% was between the genotypes G10 and G1, and G1 and G8. Overall, 160 bands amplified through 10 seeded date palm trees ranged from 150 bp to 1600 bp. The markers of SCoT-02, SCoT-03, SCoT-04, and SCoT-09 were in a cluster. The genotypes G4 and G5 were in a cluster along with G6.

Download this article

SABRAO Journal of Breeding and Genetics
56 (3) 929-939, 2024
http://doi.org/10.54910/sabrao2024.56.3.3
http://sabraojournal.org/
pISSN 1029-7073; eISSN 2224-8978

Date published: June 2024

« Back to main page of SABRAO Journal of Breeding and Genetics Vol. 56 No. 3

GENE PYRAMIDING THROUGH INTERCROSS POPULATIONS FOR BACTERIAL BLIGHT AND BROWN PLANTHOPPER RESISTANCE IN RICE

M.F. ABBASI, A.U. DIN, and F.M. ABBASI

Citation: Abbasi MF, Din AU, Abbasi FM (2024) Gene pyramiding through intercross populations for bacterial blight and brown planthopper resistance in rice. SABRAO J. Breed. Genet. 56(3): 918-928. http://doi.org/10.54910/sabrao2024.56.3.2.

Summary

Conventional breeding approaches often rely on bi-parental crosses, in which analysis occurs only on two alleles, and genetic recombination in such a population is insufficient, limiting genetic diversity. Multi-parent advanced generation inter-cross (MAGIC) populations display large sets of recombinant inbred lines (RILs) that exhibit a genetic mosaic of multiple founder parents. MAGIC populations result in a broader genetic base that has emerged as a powerful tool for genetic analysis and breeding for disease resistance in rice. This study developed the MAGIC population by intermating eight diverse founder parents. Conducting the molecular survey sought to analyze the genes resistant to bacterial blight (BB) and brown planthopper (BPH). The research used primers specific for Xa21, xa13, Xa4, and Bph1 in the polymerase chain reaction (PCR). The survey identified combinations of three genes: (Xa4+xa13+Xa21) in BR52 and (Xa4+xa13+Bph1) in BR43, BR44, BR48, and BR58. Two-gene combination (xa13 and Xa4) materialized in BR53, BR54, BR60, BR73, BR85, and BR86, while identifying a combination of xa13 and Bph1 in BR11, BR41, and BR99. Xa4 was present in 14, xa13 in six, and Bph1 in three lines. Screening the population against Xanthomonas oryzae validated the presence of BB-resistant genes. The consistent finding is that the RILs with a combination of two or more genes express a high level of resistance compared with the RILs with a single gene. The RILs with Xa4 and xa13 expressed more resistance than the lines with xa13 and Bph1. Employing the MAGIC populations approach remains to be effective for gene pyramiding.

rice (O. sativa L.), MAGIC population, bacterial blight, brown planthopper

Developing MAGIC populations succeeded in pyramiding multiple resistance genes for bacterial blight and BPH in rice (O. sativa L.). A combination of two and three genes pyramided in RILs helped enhance resistance against diseases, leading to durable resistant lines.

Download this article

SABRAO Journal of Breeding and Genetics
56 (3) 918-928, 2024
http://doi.org/10.54910/sabrao2024.56.3.2
http://sabraojournal.org/
pISSN 1029-7073; eISSN 2224-8978

Date published: June 2024

« Back to main page of SABRAO Journal of Breeding and Genetics Vol. 56 No. 3

CYTOGENETIC ANALYSIS OF COTTON HYBRIDS DERIVED FROM INTROGRESSIVE LINES

SH.E. NAMAZOV, B.I. MAMARAHIMOV, S.K. MATYOQUBOV, O.H. SODIQOVA, SH. KARIMOV, SH.U. BOBOKHUJAYEV, M.F. SANAMYAN, and M.M. DARMANOV

Citation: Namazov SHE, Mamarahimov BI, Matyoqubov SK, Sodiqova OH, Karimov SH, Bobokhujayev SHU, Sanamyan MF, Darmanov MM (2024). Cytogenetic analysis of cotton hybrids derived from introgressive lines. SABRAO J. Breed. Genet. 56(3): 906-917. http://doi.org/10.54910/sabrao2024.56.3.1.

Summary

Cotton is one of the world’s most important natural fiber and cash crops. The research carried out studies of plants F1-F4 considering the importance of cytogenetic analysis of interspecific hybrids for identifying structural differences between homologous chromosomes of crossed forms and substitution of individual chromosomes or chromosome segments because of introgression of interspecific hybrids in cotton breeding. The article comprised a cytogenetic analysis of introgressive lines obtained through the participation of intergenomic crosses and F1-F4 cotton hybrids. The results revealed that in crossed variants of F1-F4 hybrid plants, the presence of open bivalents and univalents in PMC (pollen mother cell) showed the absence of complete conjugation in the chromosomes. It could be due to the structural differences between the homologous chromosomes in the crossed forms caused by exchanging chromosomes with alien ones. According to the tetrad analysis, the average value ranged from 95.65% F1L-158/16 × Sultan to 99.61% F1L-4747-48/16 × Sultan in F1 hybrids. Based on the tetrad analysis in 16 combinations, the meiotic index ranged from 96.76 ± 0.34 to 99.54 ± 0.19 in F2 hybrids and 96.51 ± 0.56 to 99.34 ± 0.30 in F3 hybrids, and in 17 combinations, the range was from 97.14 ± 0.29 to 98.92 ± 0.12 in F4 hybrids. It also confirmed that meiosis is preceding naturally in the remaining hybrid variants, with a decrease observed in the meiotic index. The results also increased the number of other types of gametes (Monod, dyad, triad, pentad, hexad, and polyad), negatively affecting normal gametes formation.

Upland cotton, G. barbadense L., G. hirsutum L., hybrids, introgressive lines, meiosis, tetrad, sporadic, bivalent, degree of fecundity

The cytological analyses of introgressive cotton lines and hybrids confirmed their donor ability to enrich the cotton genome. Results established the stabilization of the meiotic division that raised the meiotic index and pollen fertility. The structural differences between homeologous chromosomes confirm the introgressed fragments of wild forms and valuable traits in the cultivated cotton genomes.

Download this article

SABRAO Journal of Breeding and Genetics
56 (3) 906-917, 2024
http://doi.org/10.54910/sabrao2024.56.3.1
http://sabraojournal.org/
pISSN 1029-7073; eISSN 2224-8978

Date published: June 2024

« Back to main page of SABRAO Journal of Breeding and Genetics Vol. 56 No. 3

Cotton introgressive lines assessment through seed cotton yield and fiber quality characteristics

B. AMANOV, K. MUMINOV, S. SAMANOV, F. ABDIEV, D. ARSLANOV, and N. TURSUNOVA

SUMMARY

The conducted study, with focus on the earliness and opening rate of bolls, and other economic traits of introgressive cotton lines, was carried out from 2017 to 2019 at the Institute of Genetics and Plant Experimental Biology, and Genetics and Evolution Biology Department, in Chirchik State Pedagogical Institute, Tashkent, Uzbekistan. Overall, the introgressive cotton lines were found to ripen two to 13 days earlier than a standard cotton cultivar C-6524. Particularly, in line L-РСМ, the vegetation period took 109 days and matured 12.3 days earlier than a standard cultivar check. According to the boll weight, the selected cotton lines were identified to have the best performance, as well as, good germination ability of seeds. The cotton line, Т-138, was found highly resistant to strains of Fusarium oxysporum f. sp. vasinfectum pathogenic fungi, while the lines, L-РСМ and L-138, had 80% to 100% resistance to Verticillium dahliaе fungi. The cotton lines, L-РСМ and L-141, were not infected with Fusarium solani fungi. The cluster analysis revealed that according to the economic traits, the first cluster included lines L-24 and L-138 and were found to be closely related to each other. The line, LРСМ, was included in the third cluster, and it was found that this cotton line was among the cultivars with the best performance for all the valuable economic traits. The comparative analysis of cotton lines resulted in a creation of a new medium-fiber cotton cultivar “Niso,” with the productivity of 3,830 to 5,650 kg ha-1, boll weight of 6.0 to 6.7 g, boll opening at 109.0 to 112.0 days, type IV fiber, 1000seed weight of 118.0 to 120.0 g, fiber percentage ranging from 36.9% to 41.4%, fiber length at 34.0 to 35.9 mm, and relative tensile strength (34.6 cN/tex). Cotton lines obtained on the basis of intergenomic introgression methods were included in the leading “Cotton gene pool” (Reference of the Academy of Sciences of the Republic of Uzbekistan №4/1255-2473 dated November 12, 2020). These introgressive cotton lines made it possible to enrich the collection of cotton, to evaluate wild cotton species, and to form a system of information and analysis of the electronic database of adaptable stress factors and genetically enriched samples.

Download the article

Date published: June 2022

Keywords: Cotton, introgressive lines, genome, cultivars, earliness, bolls, boll weight, fiber yield, fiber length, and strength

DOI: https://doi.org/10.54910/sabrao2022.54.2.9

Response of sugar beet to sandy soil amended by zeolite and potassium sulfate fertilization

H.E.A. NEMEATA ALLA and S.A.M. HELMY

SUMMARY

Two field experiments were carried out on a private farm at Wadi El-Natrun (latitude of 30.48° N and longitude of 30.50° E), Beheira Governorate, Egypt, in the 2019–2020 and 2020–2021 seasons, to find out the effect of adding zeolite as a soil conditioner and potassium fertilizer on growth, yield, and quality of sugar beet crop (Beta vulgaris L. var. saccharifera) grown in sandy soil conditions. The present work included 12 treatments, which were the combinations of four zeolite levels (Zero, 476, 952, and 1,428 kg ha-1), and three levels of potassium in the form of potassium sulfate (119, 178.5, and 238 kg K2.SO4 ha-1), which were added as a soil application. The treatments were arranged in a complete block design in a split plot with four replications. The results showed that higher values of the photosynthetic pigments, root diameter, fresh and foliage weights plant-1, as well as, sucrose and extracted sugar percentages, quality index, yields of the root, top, and sugar ha-1, were obtained by adding 1,428 kg zeolite, compared with the other levels of zeolite, in both seasons. However, sodium, alpha-amino N contents in the root, and sugar lost to molasses% were insignificantly affected by zeolite rates in both seasons. Application of 238 kg K2.SO4 ha-1significantly resulted in the highest values of photosynthetic pigments, root dimensions, sucrose%, and root potassium content. In addition, extracted sugar %, quality index, root, top, and sugar yields ha-1 were increased compared with the other lower K-sulphate levels in both seasons. On the contrary, sugar lost to molasses% was insignificantly affected by applied potassium sulfate in both seasons. The maximum values of root diameter, fresh weight, yields of root and top ha-1 in both seasons, and also sugar yield in the second season were produced from the interaction between applying 1,428 kg zeolite and 238 kg potassium sulfate ha1.

Download the article

Date published: June 2022

Keywords: potassium sulphate, sandy soil, sugar beet, zeolite 

DOI: http://doi.org/10.54910/sabrao2022.54.2.20

Tags, , ,

ROLE OF AGRICULTURAL EXTENSION IN THE IMPROVEMENT OF THE AGRICULTURE SECTOR IN IRAQ

S.A. HASKAH, M.H.S. AL-HAMDANY, and A.I. KHAMEES

Citation: Haskah SA, Al-Hamdany MHS, Khamees AI (2024). Role of agricultural extension in the improvement of the agriculture sector. SABRAO J. Breed. Genet. 56(2): 898-905. http://doi.org/10.54910/sabrao2024.56.2.40.

Summary

The study aimed to determine the role of workers’ comprehension level in agricultural extension centers through their knowledge of administrative processes when providing agricultural extension services in some central governorates of Iraq, as well as, some of the respondents’ characteristics and the relationship between the studied independent variables. The research area has 220 employees, with a sample of 50% selected in four governorates (Babylon, Anbar, Baghdad, and Salah al-Din) using simple random sampling. A number of agricultural extension workers selected from each of the studied governorates came from outside the research sample as a pretest to express the opinion of the sample members regarding the provision of agricultural extension services to these centers. Their number reached 25 agricultural extension workers. The reliability coefficient was 0.89 degrees, and the respondents provided data in October 2022. The arithmetic mean, standard deviation, percentage, simple and multiple correlation coefficients, and frequency distribution tables helped analyze and interpret the research results. The findings indicated that 44.55% of respondents had no knowledge about extension centers’ instructional, planning, and promotional roles in agricultural extension services. It also appears from the results that there is a weakness in the role of the respondents in the processes studied, namely, planning, coordination, communication, training, and education. The research suggests holding extension meetings to inform extension workers of their role in understanding the administrative processes of agricultural extension centers while providing extension services and the importance of that to them, as well as, training workers in their roles and using their knowledge to understand the administration.

Role of workers, agricultural extension centers, administrative operations, extension service

In light of the results, 44.79% of the workers surveyed had low knowledge of the role of extension centers. Outcomes revealed the sample members’ low educational role (50%), planning role (46.36%), and a direct and significant association between agricultural extension centers’ extension services and their staff’s unique traits. The results indicated that 49.09% of the sample members do not know the counseling extension center’s coordination role, while 44.80% do not know its training role.

Download this article

SABRAO Journal of Breeding and Genetics
56 (2) 898-905, 2024
http://doi.org/10.54910/sabrao2024.56.2.40
http://sabraojournal.org/
pISSN 1029-7073; eISSN 2224-8978

Date published: April 2024

« Back to main page of SABRAO Journal of Breeding and Genetics Vol. 56 No. 2

STAND STRUCTURE DYNAMIC OF TURKISH PINE (PINUS BRUTIA) GROWN NATURALLY IN THE ATRUSH REGION, IRAQ

M.S. YOUNIS, A.J. MOHAMMED, and S.D. ALI

Citation: Younis MS, Mohammed AJ, Ali SD (2024). Stand structure dynamic of turkish pine (Pinus brutia) grown naturally in the Atrush region, Iraq. SABRAO J. Breed. Genet. 56(2): 889-897. http://doi.org/10.54910/sabrao2024.56.2.39.

Summary

Coniferous woods of uneven age have a natural distribution in Atrush, Iraq, and this study selected 10 random samples from diverse places and densities to understand their stand dynamics, using a 17.9 m radius circular sample. The tree and stand variables and global tree coordinates measurements occurred for each sample. Using different diameters to measure total height determined the phases of tree seedlings. When the diameter was over 10 cm, the trees were over 1.3 m tall. Through analysis, it revealed that the densities of these trees spread in the study site and reached 28181.89 trees that varied widely. The number of tree members at the lower diameter was the highest, fluctuating from sample to sample, indicating variances in natural renewal between study sites. The site is rich in natural regeneration. Samples 2, 8, and 10 showed balance for the quantity of seedlings, juveniles, and trees, indicating stability in tree movement. The obtained results relied on mechanisms of community aggregation using tree spatial distribution data.

Turkish pine (Pinus brutia Ten.), stand dynamic, pattern analysis, stand characteristics, diameter and height

The study samples also showed diverse clear distribution patterns, mostly declining regularly and randomly while appearing minimally clustered. It was evident that most trees, whether of varieties, diameters, or heights, are in the first or second class, except the eighth, second, and tenth samples, indicating the strength of natural regeneration in the study area.

Download this article

SABRAO Journal of Breeding and Genetics
56 (2) 889-897, 2024
http://doi.org/10.54910/sabrao2024.56.2.39
http://sabraojournal.org/
pISSN 1029-7073; eISSN 2224-8978

Date published: April 2024

« Back to main page of SABRAO Journal of Breeding and Genetics Vol. 56 No. 2