Citation: Bakry AB, Sabra DM, Ahmed AYM (2024). Morphological, biochemical, and molecular analyses to assess the flax (Linum usitatissimum L.) Genotypes under sandy soil conditions. SABRAO J. Breed. Genet. 56(4): 1682-1693. http://doi.org/10.54910/sabrao2024.56.4.33.
Summary
Flax (Linum usitatissimum L.) is a significant marketable crop for seed, oil, fiber, and pharmaceutical products. The latest study transpired to assess the morphological, biochemical, and yield traits with inter-simple sequence repeat (ISSR) markers to determine the genetic diversity among flaxseeds of Sakha-1, Sakha-2, Sakha-3, Sakha-5, Sakha-6, Giza-12, and Amon genotypes under sandy soil conditions. Results indicated that all flax varieties varied significantly (P > 0.05) in most studied characteristics. Sakha-6 exceeded all genotypes in seed yield (0.888 t ha-1), straw yield (6.093 t ha-1), oil yield (0.302 t ha-1), and biological yield (6.981 t ha-1). These increases were due to the rise in different biochemical contents of carotenoids (0.601 mg), proline (34.81 mg), free amino acids (396.85 mg), oil (35.46%), phenolic (189.61 mg), and total carbohydrates (32.07%), which reflected on seed yield plant-1 (0.509 g). Flax genotypes showed high genetic variations; eight of the 15 ISSR primers employed resulted in 74 bands, with 35 as polymorphic. The average percentage polymorphism of the amplified loci ranged from 16.67% to 50%, the average number of polymorphic bands per primer was 4.38, and the average number of amplified bands per primer was 9.25. The marker index for ISSR values ranged from 0.08 to 2.40 for UBC-846 and UBC-825, respectively. The similarity between genotypes ranged from 0.58 to 0.90. Three markers showed significant regression association with the six traits.
Seven flax (L. usitatissimum L.) genotypes incurred morphological, biochemical, and ISSR markers evaluation. The flax genotypes varied significantly in all studied traits. They showed a high level of genetic variations, with the genotypes divided into two main clusters and a dendrogram created using the similarity matrix produced by UPGMA.
Citation: Aswidinnoor H, Listiyanto R, Suwarno WB (2023). Genetic architecture of new plant type rice (Oryza sativa L.) lines based on a 12-years multi-experiment. SABRAO J. Breed. Genet. 55(4): 1025-1037. http://doi.org/10.54910/sabrao2023.55.4.2.
Summary
New plant-type (NPT) rice can increase grain yield globally. Although many studies have shown the association between harvest and yield-related traits in rice, it remains obscure in the case of NPT rice. This study aimed to elucidate the relationship between agronomic and yield features in new plant-type rice based on a 12-years multi-experiment. A large dataset of 704 NPT rice lines of various generations (F4 to F10), derived from 24 different populations, underwent study. The analysis of variance showed a highly significant population effect (P < 0.01) on all traits studied. The NPT rice populations had groupings into four clusters, with a highly substantial cluster effect (P < 0.01) on the number of total tillers (NTT), number of total grains (NTG), number of filled grains (NFG), and thousand-grain weight (TGW). Standard best NPT lines from each experiment achieved an average of 1.67 t ha-1 or 26% higher yield than the Ciherang variety. Determining the yield advantage of NPT lines was by higher plant height (PH) (r = 0.37), panicle length (PL) (r = 0.15), NTG (r = 0.28), NFG (r = 0.28), TGW (r = 0.10), and lower days to harvest (DTH) (r = -0.10). The principal component analysis biplot revealed that NFG could better serve as a selection characteristic for enhancing grain yield in developing NPT rice adapted to irrigated tropical ecosystems.
The new plant-type rice architecture allows a higher yield (26%) than the green revolution rice type represented by the Ciherang variety. Genetic diversity among the NPT lines is prevalent; therefore, breeding-improved NPT rice varieties are promising.
G.M. EL-SAYED , G.M. SOLIMAN, U.S. ELKELANY, H.H. AMEEN, S.A. NOUR, and W. HUSSEIN
Citation: El-Sayed GM, Soliman GM, Elkelany US, Ameen HH, Nour SA, Hussein W (2024). Overproduction of neutral protease in Bacillus subtilis 168 through site-directed mutation for biocontrol of Meloidogyne incognita. SABRAO J. Breed. Genet. 56(4): 1669-1681. http://doi.org/10.54910/sabrao2024.56.4.32.
Summary
The root-knot nematode (RKN), Meloidogyne incognita, poses significant challenges for many important crops. Identified distinctive bacterial proteases have emerged as potential nematicides. In this study, the nprE from Bacillus subtilis 168 encoded the neutral metalloprotease, effectively enhancing it through a site-directed mutation. The enzyme-specific activity of pro118, secreted by the modified strain BS118, reached 215.4 U mg-1. It was twice that of pro168 produced by the wild-type strain BS168, which recorded an enzyme-specific activity of 101.6 U mg-1. The protease, pro118, caused the highest mortality in M. incognita juveniles, J2S (91.3% to 84.5%) after 48 h of in vitro treatment. Furthermore, when simultaneously applying pro118 with the nematode infection, it notably decreased the number of J2S, root galls, and egg masses/root systems by 19.5%, 18.8%, and 26.2%, respectively, compared with its application one week after the nematode infection. This consistent trend also manifested in the plant shoot length and fresh weight enrichment, which showed an increase of 9.7% and 14.7% in the first treatment versus the second. In conclusion, the study asserts that applying neutral metalloprotease as a bioagent to biocontrol M. incognita is a promising approach for mitigating the impact of this agricultural pest.
The site-directed mutation, which involves replacing the native promoter with another constitutive one, is a promising approach for constructing strains with higher protease modifications. This method’s subsequent employment as a bioagent against Meloidogyne incognita infection led to significant plant growth and health improvements.
Citation: Kuse KG, Riadi M, Sjahril R (2024). Response of low nickel fertilization on the quantitative parameters of shallot under hydroponic conditions. SABRAO J. Breed. Genet. 56(4): 1661-1668. http://doi.org/10.54910/sabrao2024.56.4.31.
Summary
Nickel (Ni) is an essential micronutrient known for improving the growth and yield of various crops at low concentrations. However, the nickel’s adequate information on shallots is insufficient. This study found out the effect of Ni fertilization with four concentrations (0.0, 0.025, 0.1, and 0.4 mg L-1 derived from NiSO4.6H2O) on plant and bulb weight, nutrient solution usage, and bulb nickel and nitrate content of two shallot cultivars (Lokananta and Sanren F1) using hydroponic condition, arranged in a split-plot design under field conditions. Increased Ni concentration (0.4 mg L-1) negatively affected plant height, total plant weight, bulb weight per plant, and total nutrient solution usage, while it increased the bulb nickel and leaf carotenoid contents. The Ni concentration (0.025 mg L-1) can be safer for shallot plant absorption with optimum growth and yield. Shallot cultivar Sanren F1 provides considerably better results in terms of yield components than cultivar Lokananta. Bulb weight per plant appeared positively correlated with the number of leaves, bulbs, total bulb diameter, and total volume of nutrient solution used per plant. The total bulb diameter per plant showed a better direct effect on the shallot bulb yield at various Ni levels.
Shallot (Allium cepa L. Aggregatum group), cultivars, Ni nutrition, growth, physiological components, yield traits, path analysis, Pearson’s correlation
Ni at a low concentration (0.025 mg L-1) stimulates the growth and physiological components of shallot plants, which, in turn, increases bulb yield. Leaf carotenoid content and water uptake can assess the response of shallot plants to heavy metal stress conditions.
Citation: Nur M, Syam’un E, Sjam S (2024). Effect of horse manure vermicompost on the growth and yield traits of shallot (Allium ascalonicum L.). SABRAO J. Breed. Genet. 56(4): 1654-1660. http://doi.org/10.54910/sabrao2024.56.4.30.
Summary
The presented study determined the effects of shallot cultivars and levels of horse manure vermicompost on its growth and production traits. The developed shallot cultivars came from true seeds. The research materialized from June to October 2022 at the Agricultural Technology Research and Development Institute (IP2TP) in Kelara District, Jeneponto Regency, South Sulawesi, Indonesia. This study employed a factorial design with two factors and three replications. The first factor included four doses of vermicompost: 0, 5, 10, and 15 t ha-1. The second factor consisted of three shallot cultivars (Lokananta, Maserati, and Sanren-F1). The results revealed that the shallot cultivar Sanren-F1 recorded the highest average plant height, bulb weight, diameter, and yield. The horse manure vermicompost treatment with the 15 t ha-1 dose also emerged with the maximum average plant height, number of leaves, bulb weight, and bulb diameter over other applications. However, the horse manure vermicompost (10 t ha-1) gave the foremost bulb yield.
Three shallot cultivars responded differently to the horse manure vermicompost applications. However, the genotype Sanren-F1 generally has the best growth and production. The single application of horse vermicompost (10 t ha-1) increased the shallot production without using inorganic fertilizers.
Citation: Alsharari SF, Ibrahim AA, Okasha SA (2023). Combining ability for yield, oil content, and physiobiochemical characters of canola (Brassica napus L.) Under salt stress conditions. SABRAO J. Breed. Genet. 55(4): 1003-1024. http://doi.org/10.54910/sabrao2023.55.4.1.
Summary
Creating a half-diallel cross succeeded among seven diverse canola genotypes. The obtained 21 F1 hybrids with their seven parents underwent three salinity stress levels exposure—3.91 dsm-1 (Normal), 6.24 dsm-1 (S1), and 7.81 dsm-1 (S2) —during the 2020/2021 growing seasons. Salinity treatments significantly reduced days to 50% flowering, plant height, number of primary branches, pods/plant, 1000-seed weight, seed yield/plant, seed oil content, relative water content, calcium, potassium, and the ratio between K+ and Na+ compared with a normal condition. Proline content, osmotic pressure, and Na+ were considerably higher under salinity stress conditions. Highly significant differences showed among the parents and hybrids for all traits across the tested environments. General (GCA) and specific (SCA) combining ability effects were highly significant for all attributes. The parental genotypes Serw4 and Pactol resulted as good general combiners for increased seed oil content (SOC), seed yield/plant (SYPP), and some of its components in research environments. The hybrid combinations H2/S × Serw4 and Serw4 × Serw6 were good specific combiners for days to first flower (DTF), number of primary branches (NPB), number of pods per plant (NP), a thousand seed weight (TSW), seed yield per plant (SYPP), seed oil content (SOC), proline content (ProC), Ca++, and K+/Na+. The SDS-PAGE analysis of seed proteins indicated high levels of genetic variability and revealed some vital biochemical markers for salt tolerance.
Parents and F1 hybrids showed high genetic variation for all attributes in nonsaline and saline environments. The parental genotypes Serw4 and Pactol were effective general combiners for enhancing seed yield and other features under stressed and non-stressed situations. H2/S × Serw4 and Serw4 × Serw6 were good specific combiners for most traits and can benefit future hybrid development to improve canola salt tolerance.
Citation: Naeem M, Mamoon-Ur-Rashid M (2024). Insecticidal potential of hexane plant extract against pulse beetle (Callosobruchus analis) on stored mung bean (Vigna radiata L.). SABRAO J. Breed. Genet. 56(4): 1643- 1653. http://doi.org/10.54910/sabrao2024.56.4.29.
Summary
The pulse beetle is a primary pest of mung bean (Vigna radiata L.), causing heavy losses during storage. Conventional control of pulse beetle with insecticides has led to various challenges. This study sought safer alternatives by exploring the efficacy of hexane extracts derived from seeds of Azadirachta indica and Trachyspermum ammi, Curcuma longa rhizomes, Allium sativum bulbs, Citrullus colocynthis fruits, and Caralluma tuberculata stems against pulse beetle. Each plant extract was tested at six concentrations of 0.5%, 1.0%, 1.5%, 2.0%, 2.5%, and 3.0% w/v, under the constant laboratory conditions of the Gomal University, Dera Ismail Khan, Khyber Pakhtunkhwa, Pakistan. The hexane extracts prepared from A. sativum and C. longa at 3% concentration exhibited significant efficacy, resulting in mortality rates of 99.20% and 94.40% of adult beetles, respectively. Furthermore, mung bean grains treated with the A. sativum extracts at the maximum concentration (3%) demonstrated minimum egg deposition (2.20 per grains-20), prolonged time to adult emergence (25.10 days), minimum progeny emergence (33.40), lowest infestation (5.47%), minimum weight loss (4.39%), and shortest adult life span (8.70 days). The hexane plant extracts prepared from A. sativum and C. longa powders at higher concentrations (2.5% and 3.0%) can benefit the safer management of pulse beetles.
The hexane plant extract demonstrated insecticidal properties and caused significant mortality of beetle adults in mung bean (Vigna radiata L.). The hexane plant extracts also affected significantly the biology and survival of beetles. Among the six-tested plant extracts, the hexane extracts of A. sativum and C. longa proved the most effective, whereas C. tuberculata extracts were found least effective.
Citation: Ishaq MZ, Qayyum A, Noor E (2024). The role of potassium in improving drought tolerance in upland cotton (Gossypium hirsutum L.). SABRAO J. Breed. Genet. 56(4): 1632-1642. http://doi.org/10.54910/sabrao2024.56.4.28.
Summary
Cotton (Gossypium hirsutum L.) is a vital cash crop in Pakistan, but climate change scenarios threatened its production by biotic and abiotic stress, especially drought. Nutrient management, specifically potassium (K) fertilization, typically alleviates the effects of drought. To this end, a greenhouse experiment evaluated the genotypes for drought stress tolerance and its management by K fertilization. The experiment consisted of 70 cotton genotypes factorially combined with two water levels (standard irrigation and drought stress) and two potassium levels (control and 102 mg/kg of potassium). Data collection occurred for shoot and root lengths, fresh shoot and root weights, dry shoot and root weights, root shoot ratio, total dry matter production, and K uptake after 45 days of germination. Results depicted that mean squares for genotypes, drought, potassium, and their interaction were significant for shoot and root lengths, fresh shoot and root weights, dry shoot and root weights, total dry weight, and potassium uptake, while some traits showed nonsignificant differences. Based on the principal component analysis, membership function value, and genotypic diversity, five genotypes emerged as tolerant: CIM-496, IR-3701, Cp-15/2, FH-113, and CIM-1100, and three, i.e., 4-F, MNH-129, and FH-1000, as susceptible. Tolerant and susceptible genotypes can further benefit breeding programs to develop cotton genotypes adaptable to drought stress and with better K uptake.
Cotton (G. hirsutum L.), drought, potassium, PCA, cluster, the membership function value
The five upland cotton (Gossypium hirsutum L.) genotypes, CIM-496, IR-3701, Cp-15/2, FH-113, and CIM-1100, performed better for potassium uptake under drought stress conditions. The three susceptible genotypes were the FH-1000, 4-F, and MNH-129.
Citation: Yapias RJM, Soto JP, Victorio JPE, Huamaní RG, Astete JAQ, Areche FO, Araujo VJS (2024). Phytoremediation and nutritional potential of the ice plants (Mesembryanthemum crystallinum L.). SABRAO J. Breed. Genet. 56(4): 1621-1631. http://doi.org/10.54910/sabrao2024.56.4.27.
Summary
Ice plant (Mesembryanthemum crystallinum L.) is an edible plant with a high content of healthy minerals and ingredients beneficial to human health. The presented study aimed to summarize the key findings in terms of phytoremediation capabilities and nutritional values of the ice plant. A rigorous scientometric review technique and Tree of Science heuristic analyses helped compile all those findings. The scientometric review used various databases (Scopus and Science Direct) following the PIO (Population, Intervention, and Outputs) strategy, which helped to formulate the search equations and identify the most relevant articles published in the last two decades. According to scientometric mapping, the scholarly work on M. crystallinum enhanced by 12.65% between 2006 and 2023, focusing on its phytoremediation potential, salt adaptability, antioxidant capacity, and phenolic compounds. The present findings emphasized more investigation regarding its potential uses in the food sector, namely, its phytoremediation capacities for cleaning up contaminated water and soil.
Ice plant (M. crystallinum L.), salt stress, flavonoids, phytoremediation potential, salt adaptability, antioxidant capacity, phenolic compounds
Reports on Mesembryanthemum crystallinum L. revealed a 12.65% increase in studying its phytoremediation capability, salt adaptation, antioxidant capacity, and phenolic compounds from 2006 to 2023. The study also highlights the importance of further research on its possible applications in the food industry, particularly its phytoremediation capabilities for treating polluted water and soils.
M.H. FENDIYANTO, R.D. SATRIO, A. JUNAEDI, E.D.J. SUPENA, A. HAIRMANSIS, S. NUGROHO, and M. MIFTAHUDIN
Citation: Fendiyanto MH, Satrio RD, Junaedi A, Supena EDJ, Hairmansis A, Nugroho S, Miftahudin M (2024). Correlation and path analyses for shoot architecture, photosynthesis, and yield-related traits in recombinant inbred lines of rice. SABRAO J. Breed. Genet. 56(4): 1609-1620 http://doi.org/10.54910/sabrao2024.56.4.26.
Summary
Rice (Oryza sativa L.) plant architecture is crucial in rice productivity enhancement, particularly in forecasting agronomic-related traits. The presented research characterized the shoot architecture, photosynthesis, and yield-related traits in the F9 generation of rice recombinant inbred lines (RILs) derived from a cross between cultivar IR64 and local cultivar Hawara Bunar through correlation and path analyses among the various features. Rice RILs and parental cultivars’ sowing transpired in the greenhouse and the field. The greenhouse experiment commenced growing the rice seeds of 90 RILs and their parental lines in PVC tubes (20 cm in diameter and 50 cm in height) with sand soil as a medium. The study employed the upland rice cultivation system for the field experiment to cultivate the rice genotypes. The study used a randomized complete block design (RCBD) with three replications. Shoot plant architecture, physiological, and yield traits observation continued at various stages of plant growth. A significant positive correlation to the seed yield per plant appeared in the maturative stage by the total seed weight, transpiration efficiency, intercellular CO2 concentration, and intercellular CO2 pressure. A substantial positive indirect effect on grain yield also surfaced from the net transpiration rate and its efficiency, intercellular CO2 concentration, and CO2 pressure. Therefore, the shoot architecture significantly affects the photosynthetic rate and grain yield.
Correlation and path analyses revealed a relationship among shoot architecture, photosynthesis rate, and yield-related traits in the 9th generation of rice recombinant inbred lines (RILs) derived from a cross between cv. IR64 × Hawara Bunar.